Motif View

Internal ID 17656043
Source Database TransTermHP TERM 695
Feature Type terminator
Name
Rho-independent transcription terminator TERM 695
Sequence GCCCGGCATTCGCCGGGC
Look for more occurrences
Start 3204474
End 3204491
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCGGAAACGAAAAA(5' tail) GCCCGGC(5' stem) GAAT(loop) GCCGGGC(3' stem) TTTTTCTCGTCGCGC(3' tail). Confidence: 100. opp_overlap 3204474, overlap 3204468 3204467

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685