Motif View

Internal ID 17655989
Source Database TransTermHP TERM 604
Feature Type terminator
Name
Rho-independent transcription terminator TERM 604
Sequence GCCGCCGGCCACAGGGCCGGCGGC
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Start 2860302
End 2860325
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCTAGTCAGTGAGAA(5' tail) GCCGCCGGCC(5' stem) CTGT(loop) GGCCGGCGGC(3' stem) GGAAGCATTCGGGGC(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685