Motif View

Internal ID 17655987
Source Database TransTermHP TERM 602
Feature Type terminator
Name
Rho-independent transcription terminator TERM 602
Sequence GGCGGCTGGTCGCTGGCGACCATGCCGCC
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Start 2824614
End 2824642
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCTGGCGGAAGAA(5' tail) GGCGGCATGGTCG(5' stem) CCAG(loop) CGACCA-GCCGCC(3' stem) CTCCCCGCTCCCCGC(3' tail). Confidence: 91. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685