Motif View

Internal ID 17655986
Source Database TransTermHP TERM 601
Feature Type terminator
Name
Rho-independent transcription terminator TERM 601
Sequence GGCGCCAGTCATGGCGCC
Look for more occurrences
Start 2824563
End 2824580
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGGACAAGTCCTGA(5' tail) GGCGCCA(5' stem) GTCA(loop) TGGCGCC(3' stem) TTTTTTTATCCGCCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685