Motif View

Internal ID 17655974
Source Database TransTermHP TERM 577
Feature Type terminator
Name
Rho-independent transcription terminator TERM 577
Sequence AAGCCCGCCTTCAGGCGGGCTC
Look for more occurrences
Start 2657756
End 2657777
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGTACAGAAACAAA(5' tail) GAGCCCGCC(5' stem) TGAA(loop) GGCGGGCTT(3' stem) TGAACGGAACGGACC(3' tail). Confidence: 95. opp_overlap 2657758, overlap 2657758

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685