Motif View

Internal ID 17655973
Source Database TransTermHP TERM 576
Feature Type terminator
Name
Rho-independent transcription terminator TERM 576
Sequence CGCCCCGCAATGCGGGGCG
Look for more occurrences
Start 2657654
End 2657672
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GACTGCGAAAAAGAA(5' tail) CGCCCCGC(5' stem) AAT(loop) GCGGGGCG(3' stem) TTCTGCTTCTCGGCT(3' tail). Confidence: 100. opp_overlap 2657651, overlap 2657651

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685