Motif View

Internal ID 17655972
Source Database TransTermHP TERM 575
Feature Type terminator
Name
Rho-independent transcription terminator TERM 575
Sequence GAACGCCCCGCATTGCGGGGCGTTC
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Start 2657651
End 2657675
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCGACTGCGAAAAA(5' tail) GAACGCCCCGC(5' stem) AAT(loop) GCGGGGCGTTC(3' stem) TGCTTCTCGGCTACC(3' tail). Confidence: 100. opp_overlap 2657651 2657654

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685