Motif View

Internal ID 17655925
Source Database TransTermHP TERM 497
Feature Type terminator
Name
Rho-independent transcription terminator TERM 497
Sequence GCCCCGCGGATGCGGGGC
Look for more occurrences
Start 2146921
End 2146938
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCCGGAATGAAAAA(5' tail) GCCCCGC(5' stem) GGAT(loop) GCGGGGC(3' stem) TTTTGCGTTGCGCGA(3' tail). Confidence: 100. opp_overlap 2146921

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685