Motif View

Internal ID 17655901
Source Database TransTermHP TERM 464
Feature Type terminator
Name
Rho-independent transcription terminator TERM 464
Sequence GGGGCCTTCGGGCCCC
Look for more occurrences
Start 1956103
End 1956118
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGCATGAAAGAGCA(5' tail) GGGGCC(5' stem) TTCG(loop) GGCCCC(3' stem) TTTTCTTTTCCGACT(3' tail). Confidence: 100. opp_overlap 1956103 1956098

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685