Motif View

Internal ID 17655843
Source Database TransTermHP TERM 386
Feature Type terminator
Name
Rho-independent transcription terminator TERM 386
Sequence CGCCAGGCCCCGCCTGGCG
Look for more occurrences
Start 1679309
End 1679327
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTCTCGAATAAGAAA(5' tail) CGCCAGGC(5' stem) GGG(loop) GCCTGGCG(3' stem) TCGGGGGCGGAGCGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685