Motif View

Internal ID 17655707
Source Database TransTermHP TERM 169
Feature Type terminator
Name
Rho-independent transcription terminator TERM 169
Sequence GACCGGCAGCCCTATGGCTGCCGGTC
Look for more occurrences
Start 748605
End 748630
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGAATCGATACGAG(5' tail) GACCGGCAGCC(5' stem) CTAT(loop) GGCTGCCGGTC(3' stem) TTTTTTCTTGTGGGG(3' tail). Confidence: 100. opp_overlap 748565 748604

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685