Motif View

Internal ID 17655295
Source Database TransTermHP TERM 1156
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1156
Sequence CCGGGCCTGGCGCCCGG
Look for more occurrences
Start 4598186
End 4598202
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAGGCATGAAAAAA(5' tail) CCGGGC(5' stem) GCCAG(loop) GCCCGG(3' stem) TTTCCGGTGTCGAAA(3' tail). Confidence: 100. opp_overlap 4598186

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685