Motif View

Internal ID 17655170
Source Database TransTermHP TERM 960
Feature Type terminator
Name
Rho-independent transcription terminator TERM 960
Sequence GGGCGGACACCTTCGGGTGGCCGCCC
Look for more occurrences
Start 3919697
End 3919722
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCGCAACGAAAAA(5' tail) GGGCGGCCACC(5' stem) CGAA(loop) GGTGTCCGCCC(3' stem) TTTTTCGTCGCCAGC(3' tail). Confidence: 100. opp_overlap 3919697

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685