Motif View

Internal ID 17654880
Source Database TransTermHP TERM 481
Feature Type terminator
Name
Rho-independent transcription terminator TERM 481
Sequence GGGCGTCCTTCCGGACGCCC
Look for more occurrences
Start 1687809
End 1687828
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGGGGGATAAAAGAA(5' tail) GGGCGTCC(5' stem) GGAA(loop) GGACGCCC(3' stem) TGAAGATGATCATGG(3' tail). Confidence: 100. overlap 1687806

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685