Motif View

Internal ID 17653800
Source Database TransTermHP TERM 297
Feature Type terminator
Name
Rho-independent transcription terminator TERM 297
Sequence GCCCGGCCATCGAGCCGGGC
Look for more occurrences
Start 1826195
End 1826214
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCCCAACGAAAAA(5' tail) GCCCGGC(5' stem) TCGATG(loop) GCCGGGC(3' stem) TCTTTCGCTGCGGGT(3' tail). Confidence: 100. opp_overlap 1826195 1826193

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685