Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS17710 (tssB1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis subsp. aureofaciens 30-84
GCF_000281915.1|latest |
| Locus Tag |
PCHL3084_RS17710
|
| NCBI Old Locus Tag | Pchl3084_3415 |
| Name |
tssB1
Synonym: Pchl3084_3415 |
| Replicon | chromosome |
| Genomic location | 4046577 - 4047092 (+ strand) |
Cross-References
| RefSeq | WP_009044338.1 |
| GI | 496335160 |
| NCBI Locus Tag | PCHL3084_RS17710 |
| NCBI Old Locus Tag | Pchl3084_3415 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.00 |
| Kyte-Doolittle Hydrophobicity Value | -0.198 |
| Molecular Weight (kDa) | 18.7 |
| Isoelectric Point (pI) | 4.71 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4UQZ | PROTEIN TRANSPORT | 06/25/14 | Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes | PSEUDOMONAS AERUGINOSA PAO1 | 1.599 | X-RAY DIFFRACTION | 91.8 |
| 5N8N | STRUCTURAL PROTEIN | 02/23/17 | Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 93.9 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000082 (1224 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PCHL3084_RS17710
Search term: tssB1
|
Human Homologs
References
No references are associated with this feature.