Pseudomonas chlororaphis subsp. aureofaciens 30-84, PCHL3084_RS02310 (rfbB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas chlororaphis subsp. aureofaciens 30-84
GCF_000281915.1|latest
Locus Tag
PCHL3084_RS02310
NCBI Old Locus TagPchl3084_0315
Name
rfbB
Synonym: Pchl3084_0315
Replicon chromosome
Genomic location 528077 - 529159 (- strand)

Cross-References

RefSeq WP_009041725.1
GI 496332547
EC Number 4.2.1.46
NCBI Locus Tag PCHL3084_RS02310
NCBI Old Locus Tag Pchl3084_0315

Product

Feature Type CDS
Coding Frame 1
Product Name
dTDP-glucose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -12.72
Kyte-Doolittle Hydrophobicity Value -0.205
Molecular Weight (kDa) 40.2
Isoelectric Point (pI) 5.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004752 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PCHL3084_RS02310
Search term: rfbB

Human Homologs

Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 1.2e-26
Percent Identity: 26.8
Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 1.2e-26
Percent Identity: 26.8

References

No references are associated with this feature.