Pseudomonas fluorescens SS101, PflSS101_4846 (ssb)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SS101
GCF_000263675.1|latest |
| Locus Tag |
PflSS101_4846
|
| NCBI Locus Tag | PFLSS101_RS03140 |
| Name |
ssb
|
| Replicon | chromosome |
| Genomic location | 5485282 - 5485797 (- strand) |
Cross-References
| RefSeq | WP_003194626.1 |
| GI | 489287054 |
| NCBI Locus Tag | PFLSS101_RS03140 |
| NCBI Old Locus Tag | PflSS101_4846 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
single-stranded DNA-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.80 |
| Kyte-Doolittle Hydrophobicity Value | -0.991 |
| Molecular Weight (kDa) | 19.1 |
| Isoelectric Point (pI) | 5.98 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001478 (538 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflSS101_4846
Search term: ssb
Search term: single-stranded DNA-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
9.8e-16
Percent Identity:
38.2
|
References
No references are associated with this feature.