Pseudomonas fluorescens SS101, PflSS101_3928 (ligA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SS101
GCF_000263675.1|latest |
| Locus Tag |
PflSS101_3928
|
| NCBI Locus Tag | PFLSS101_RS07545 |
| Name |
ligA
|
| Replicon | chromosome |
| Genomic location | 4467354 - 4469720 (- strand) |
Cross-References
| RefSeq | WP_003193237.1 |
| GI | 489285649 |
| EC Number | 6.5.1.2 |
| NCBI Locus Tag | PFLSS101_RS07545 |
| NCBI Old Locus Tag | PflSS101_3928 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
NAD-dependent DNA ligase LigA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.19 |
| Kyte-Doolittle Hydrophobicity Value | -0.177 |
| Molecular Weight (kDa) | 86.0 |
| Isoelectric Point (pI) | 5.83 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003829 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflSS101_3928
Search term: ligA
Search term: NAD-dependent DNA ligase LigA
|
Human Homologs
References
No references are associated with this feature.