Pseudomonas fluorescens SS101, PflSS101_2001 (scoA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens SS101
GCF_000263675.1|latest |
| Locus Tag |
PflSS101_2001
|
| NCBI Locus Tag | PFLSS101_RS16700 |
| Name |
scoA
|
| Replicon | chromosome |
| Genomic location | 2228160 - 2228858 (- strand) |
Cross-References
| RefSeq | WP_003190329.1 |
| GI | 489282712 |
| EC Number | 2.8.3.5 |
| NCBI Locus Tag | PFLSS101_RS16700 |
| NCBI Old Locus Tag | PflSS101_2001 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
succinyl-CoA:3-ketoacid-CoA transferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.37 |
| Kyte-Doolittle Hydrophobicity Value | -0.062 |
| Molecular Weight (kDa) | 25.0 |
| Isoelectric Point (pI) | 5.02 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003436 (529 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflSS101_2001
Search term: scoA
Search term: succinyl-CoA:3-ketoacid-CoA transferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value:
5.0e-71
Percent Identity:
57.3
|
References
No references are associated with this feature.