Pseudomonas fluorescens Q2-87, PflQ2_5597 (tssF2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Q2-87
GCF_000281895.1|latest |
| Locus Tag |
PflQ2_5597
|
| NCBI Locus Tag | PFLQ2_RS00550 |
| Name |
tssF2
|
| Replicon | chromosome |
| Genomic location | 6229886 - 6231673 (- strand) |
Cross-References
| RefSeq | WP_003187040.1 |
| GI | 489279386 |
| NCBI Locus Tag | PFLQ2_RS00550 |
| NCBI Old Locus Tag | PflQ2_5597 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.86 |
| Kyte-Doolittle Hydrophobicity Value | -0.308 |
| Molecular Weight (kDa) | 68.2 |
| Isoelectric Point (pI) | 6.14 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000087 (1217 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflQ2_5597
Search term: tssF2
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.