Pseudomonas fluorescens Q2-87, PflQ2_2153 (tssE3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Q2-87
GCF_000281895.1|latest |
| Locus Tag |
PflQ2_2153
|
| NCBI Locus Tag | PFLQ2_RS17050 |
| Name |
tssE3
|
| Replicon | chromosome |
| Genomic location | 2343892 - 2344335 (- strand) |
Cross-References
| RefSeq | WP_003180568.1 |
| GI | 489272851 |
| NCBI Locus Tag | PFLQ2_RS17050 |
| NCBI Old Locus Tag | PflQ2_2153 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.59 |
| Kyte-Doolittle Hydrophobicity Value | -0.607 |
| Molecular Weight (kDa) | 16.7 |
| Isoelectric Point (pI) | 6.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003155 (331 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PflQ2_2153
Search term: tssE3
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.