Pseudomonas synxantha BG33R, PseBG33_4490 (dinB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas synxantha BG33R - Assembly GCF_000263715.2
GCF_000263715.2|latest |
| Locus Tag |
PseBG33_4490
|
| NCBI Locus Tag | PSEBG33_RS05510 |
| Name |
dinB
|
| Replicon | chromosome |
| Genomic location | 5048417 - 5049475 (- strand) |
Cross-References
| RefSeq | WP_005791058.1 |
| GI | 492254293 |
| NCBI Locus Tag | PSEBG33_RS05510 |
| NCBI Old Locus Tag | PseBG33_4490 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA polymerase IV
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.27 |
| Kyte-Doolittle Hydrophobicity Value | -0.304 |
| Molecular Weight (kDa) | 39.3 |
| Isoelectric Point (pI) | 8.12 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000889 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PseBG33_4490
Search term: dinB
Search term: DNA polymerase IV
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value:
1.1e-40
Percent Identity:
32.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value:
1.1e-40
Percent Identity:
32.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value:
1.1e-40
Percent Identity:
32.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value:
1.1e-40
Percent Identity:
32.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value:
1.1e-40
Percent Identity:
32.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value:
1.1e-40
Percent Identity:
32.6
|
References
No references are associated with this feature.