Pseudomonas synxantha BG33R, PseBG33_1912
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas synxantha BG33R - Assembly GCF_000263715.2
GCF_000263715.2|latest |
| Locus Tag |
PseBG33_1912
|
| NCBI Locus Tag | PSEBG33_RS17650 |
| Name |
|
| Replicon | chromosome |
| Genomic location | 2090961 - 2091722 (+ strand) |
Cross-References
| RefSeq | WP_005786640.1 |
| GI | 492242176 |
| NCBI Locus Tag | PSEBG33_RS17650 |
| NCBI Old Locus Tag | PseBG33_1912 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.65 |
| Kyte-Doolittle Hydrophobicity Value | 0.410 |
| Molecular Weight (kDa) | 26.0 |
| Isoelectric Point (pI) | 5.83 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000180 (2633 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PseBG33_1912
Search term: short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
3.3e-28
Percent Identity:
34.8
|
|
Ensembl
110, assembly
GRCh38.p14
|
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value:
3.3e-28
Percent Identity:
34.8
|
References
No references are associated with this feature.