Pseudomonas synxantha BG33R, PseBG33_0146 (lapD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas synxantha BG33R - Assembly GCF_000263715.2
GCF_000263715.2|latest |
| Locus Tag |
PseBG33_0146
|
| NCBI Locus Tag | PSEBG33_RS26060 |
| Name |
lapD
|
| Replicon | chromosome |
| Genomic location | 159616 - 161568 (+ strand) |
Cross-References
| RefSeq | WP_005783526.1 |
| GI | 492233529 |
| NCBI Locus Tag | PSEBG33_RS26060 |
| NCBI Old Locus Tag | PseBG33_0146 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DeoR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.24 |
| Kyte-Doolittle Hydrophobicity Value | -0.091 |
| Molecular Weight (kDa) | 72.4 |
| Isoelectric Point (pI) | 6.10 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3PJV | LYASE | 11/10/10 | Structure of Pseudomonas fluorescence LapD periplasmic domain | Pseudomonas fluorescens | 1.7727 | X-RAY DIFFRACTION | 93.1 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001350 (454 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PseBG33_0146
Search term: lapD
Search term: DeoR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.