Pseudomonas sp. LAIL14HWK12:I7, D886_RS0121050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. LAIL14HWK12:I7
GCF_000483465.1|latest
Locus Tag
D886_RS0121050
Name
Replicon scaffold00002.2
Genomic location 361275 - 361574 (- strand)

Cross-References

RefSeq WP_027595786.1
GI 653582839
NCBI Locus Tag D886_RS0121050

Product

Feature Type CDS
Coding Frame 1
Product Name
XRE family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.56
Kyte-Doolittle Hydrophobicity Value -0.001
Molecular Weight (kDa) 10.9
Isoelectric Point (pI) 5.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6F8H ANTITOXIN 12/13/17 antitoxin GraA Pseudomonas putida 2.002 X-RAY DIFFRACTION 94.8
6F8S TOXIN 12/13/17 Toxin-Antitoxin complex GraTA Pseudomonas putida; Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 2.5 X-RAY DIFFRACTION 93.9
6FIX ANTITOXIN 01/19/18 antitoxin GraA in complex with its operator Pseudomonas putida; SYNTHETIC CONSTRUCT 3.8 X-RAY DIFFRACTION 94.8

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004324 (343 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: D886_RS0121050

Human Homologs

References

No references are associated with this feature.