Pseudomonas sp. CF150, CF150_20147
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. CF150
GCF_000416175.1|latest |
| Locus Tag |
CF150_20147
|
| NCBI Locus Tag | CF150_RS07500 |
| Name |
|
| Replicon | soap_scaffs_150.Contig65 |
| Genomic location | 43450 - 44322 (- strand) |
Cross-References
| RefSeq | WP_020302546.1 |
| GI | 520824201 |
| NCBI Locus Tag | CF150_RS07500 |
| NCBI Old Locus Tag | CF150_20147 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
putative short-chain dehydrogenase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.55 |
| Kyte-Doolittle Hydrophobicity Value | 0.066 |
| Molecular Weight (kDa) | 30.6 |
| Isoelectric Point (pI) | 7.38 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002686 (393 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: CF150_20147
Search term: putative short-chain dehydrogenase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]
E-value:
1.1e-48
Percent Identity:
41.7
|
References
No references are associated with this feature.