Pseudomonas sp. CFII64, CFII64_28964

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. CFII64
GCF_000416235.1|latest
Locus Tag
CFII64_28964
Name
Replicon contig_49
Genomic location 8194 - 9687 (+ strand)

Cross-References

RefSeq WP_020294373.1
GI 520798711
INSDC EPJ75482.1
NCBI Locus Tag CFII64_28964
UniParc UPI00035762DA
UniProtKB Acc S6GQ13
UniProtKB ID S6GQ13_9PSED
UniRef100 UniRef100_S6GQ13
UniRef50 UniRef50_F6ABF0
UniRef90 UniRef90_S6GQ13

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase RhlB
Synonyms
Evidence for Translation
Charge (pH 7) -5.41
Kyte-Doolittle Hydrophobicity Value -0.298
Molecular Weight (kDa) 55.1
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001808 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: CFII64_28964

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-65
Percent Identity: 39.2

References

No references are associated with this feature.