Pseudomonas sp. CFII64, CFII64_25469

Gene Feature Overview

Strain	Pseudomonas sp. CFII64 GCF_000416235.1|latest
Locus Tag	CFII64_25469
Name
Replicon	contig_45
Genomic location	513365 - 514240 (+ strand)

Cross-References

RefSeq	WP_020293684.1
GI	520797109
INSDC	EPJ77500.1
NCBI Locus Tag	CFII64_25469
UniParc	UPI0003573FCA
UniProtKB Acc	S6HYG0
UniProtKB ID	S6HYG0_9PSED
UniRef100	UniRef100_S6HYG0
UniRef50	UniRef50_G8Q4Y5
UniRef90	UniRef90_D7HTZ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-4.20
Kyte-Doolittle Hydrophobicity Value	0.052
Molecular Weight (kDa)	32.2
Isoelectric Point (pI)	6.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004529 (504 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CFII64_25469 Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000411096 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.6e-13 Percent Identity: 26.3
Ensembl 110, assembly GRCh38.p14	ENSP00000442634 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.6e-13 Percent Identity: 26.3
Ensembl 110, assembly GRCh38.p14	ENSP00000396789 ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638] E-value: 1.6e-13 Percent Identity: 26.3

References