Pseudomonas sp. CF149, CF149_21598

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_21598
NCBI Locus Tag	CF149_RS21330
Name
Replicon	contig_43
Genomic location	64942 - 65892 (- strand)

Cross-References

RefSeq	WP_019828751.1
GI	518667053
INSDC	EPJ91498.1
NCBI Locus Tag	CF149_RS21330
NCBI Old Locus Tag	CF149_21598
UniParc	UPI000356E92E
UniProtKB Acc	S6JCP1
UniProtKB ID	S6JCP1_9PSED
UniRef100	UniRef100_S6JCP1
UniRef50	UniRef50_Q9I3S3
UniRef90	UniRef90_Q9I3S3

Product

Feature Type	CDS
Coding Frame	1
Product Name	agmatinase
Synonyms
Evidence for Translation
Charge (pH 7)	-12.26
Kyte-Doolittle Hydrophobicity Value	0.008
Molecular Weight (kDa)	34.3
Isoelectric Point (pI)	5.04

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3NIO	HYDROLASE	06/16/10	Crystal structure of Pseudomonas aeruginosa guanidinobutyrase	Pseudomonas aeruginosa	2	X-RAY DIFFRACTION	90.0

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001341 (475 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_21598 Search term: agmatinase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000364986 agmatinase [Source:HGNC Symbol;Acc:HGNC:18407] E-value: 5.9e-115 Percent Identity: 63.3

References