Pseudomonas sp. CF149, CF149_21058

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_21058
NCBI Locus Tag	CF149_RS20800
Name
Replicon	soap_scaffs_149.Contig43
Genomic location	38664 - 39221 (- strand)

Cross-References

RefSeq	WP_019828625.1
GI	518666926
INSDC	EPJ91560.1
NCBI Locus Tag	CF149_RS20800
NCBI Old Locus Tag	CF149_21058
UniParc	UPI0003574FE4
UniProtKB Acc	S6HRY8
UniProtKB ID	S6HRY8_9PSED
UniRef100	UniRef100_S6HRY8
UniRef50	UniRef50_Q88RQ9
UniRef90	UniRef90_S6HRY8

Product

Feature Type	CDS
Coding Frame	1
Product Name	Sua5/YciO/YrdC/YwlC family protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.13
Kyte-Doolittle Hydrophobicity Value	-0.064
Molecular Weight (kDa)	20.4
Isoelectric Point (pI)	7.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000022 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_21058 Search term: Sua5/YciO/YrdC/YwlC family protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000362135 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905] E-value: 2.5e-09 Percent Identity: 27.3

References