Pseudomonas sp. CF149, CF149_18256

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_18256
NCBI Locus Tag	CF149_RS18030
Name
Replicon	soap_scaffs_149.Contig40
Genomic location	24670 - 25020 (+ strand)

Cross-References

RefSeq	WP_019827999.1
GI	518666297
INSDC	EPJ91936.1
NCBI Locus Tag	CF149_RS18030
NCBI Old Locus Tag	CF149_18256
UniParc	UPI00035746B9
UniProtKB Acc	S6HT28
UniProtKB ID	S6HT28_9PSED
UniRef100	UniRef100_S6HT28
UniRef50	UniRef50_A0A060V1T6
UniRef90	UniRef90_S6HT28

Product

Feature Type	CDS
Coding Frame	1
Product Name	endoribonuclease L-PSP family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.29
Kyte-Doolittle Hydrophobicity Value	0.029
Molecular Weight (kDa)	12.7
Isoelectric Point (pI)	5.58

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001525 (1734 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_18256 Search term: endoribonuclease L-PSP family protein

Human Homologs

References