Pseudomonas sp. CF149, CF149_17585

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_17585
NCBI Locus Tag	CF149_RS17365
Name
Replicon	soap_scaffs_149.Contig36
Genomic location	148356 - 149417 (- strand)

Cross-References

RefSeq	WP_019827832.1
GI	518666126
EC Number	2.7.7.7
INSDC	EPJ92456.1
NCBI Locus Tag	CF149_RS17365
NCBI Old Locus Tag	CF149_17585
UniParc	UPI0003575DE9
UniProtKB Acc	S6HQF0
UniProtKB ID	S6HQF0_9PSED
UniRef100	UniRef100_S6HQF0
UniRef50	UniRef50_Q8X7Q1
UniRef90	UniRef90_S6HQF0

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7)	2.51
Kyte-Doolittle Hydrophobicity Value	-0.286
Molecular Weight (kDa)	39.3
Isoelectric Point (pI)	7.85

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000889 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_17585 Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000258428 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 1.9e-37 Percent Identity: 30.1
Ensembl 110, assembly GRCh38.p14	ENSP00000377091 REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060] E-value: 1.9e-37 Percent Identity: 30.1

References