Pseudomonas sp. CF149, CF149_12798

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_12798
NCBI Locus Tag	CF149_RS12645
Name
Replicon	soap_scaffs_149.Contig24
Genomic location	51003 - 51701 (- strand)

Cross-References

RefSeq	WP_019826399.1
GI	518664681
INSDC	EPJ93348.1
NCBI Locus Tag	CF149_RS12645
NCBI Old Locus Tag	CF149_12798
UniParc	UPI00035813C9
UniProtKB Acc	S6JHS6
UniProtKB ID	S6JHS6_9PSED
UniRef100	UniRef100_S6JHS6
UniRef50	UniRef50_P42315
UniRef90	UniRef90_Q4KEA3

Product

Feature Type	CDS
Coding Frame	1
Product Name	3-oxoacid CoA-transferase subunit A
Synonyms
Evidence for Translation
Charge (pH 7)	-9.36
Kyte-Doolittle Hydrophobicity Value	-0.087
Molecular Weight (kDa)	25.0
Isoelectric Point (pI)	4.62

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003436 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_12798 Search term: 3-oxoacid CoA-transferase subunit A

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 3.8e-71 Percent Identity: 56.7

References