Pseudomonas sp. CF149, CF149_08552

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_08552
NCBI Locus Tag	CF149_RS08480
Name
Replicon	soap_scaffs_149.Contig12
Genomic location	17944 - 20016 (+ strand)

Cross-References

RefSeq	WP_019824894.1
GI	518663165
INSDC	EPJ94217.1
NCBI Locus Tag	CF149_RS08480
NCBI Old Locus Tag	CF149_08552
UniParc	UPI0003578954
UniProtKB Acc	S6HZ69
UniProtKB ID	S6HZ69_9PSED
UniRef100	UniRef100_S6HZ69
UniRef50	UniRef50_Q9HYC3
UniRef90	UniRef90_S6HZ69

Product

Feature Type	CDS
Coding Frame	1
Product Name	Rhs element Vgr protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.38
Kyte-Doolittle Hydrophobicity Value	-0.525
Molecular Weight (kDa)	77.5
Isoelectric Point (pI)	6.63

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000090 (3342 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_08552 Search term: Rhs element Vgr protein

Human Homologs

References