Pseudomonas sp. CF149, CF149_08182

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_08182
NCBI Locus Tag	CF149_RS08115
Name
Replicon	soap_scaffs_149.Contig11
Genomic location	93889 - 94971 (- strand)

Cross-References

RefSeq	WP_019824751.1
GI	518663021
INSDC	EPJ94506.1
NCBI Locus Tag	CF149_RS08115
NCBI Old Locus Tag	CF149_08182
UniParc	UPI000356E9DA
UniProtKB Acc	S6J9Y7
UniProtKB ID	S6J9Y7_9PSED
UniRef100	UniRef100_S6J9Y7
UniRef50	UniRef50_P27830
UniRef90	UniRef90_C3K5U6

Product

Feature Type	CDS
Coding Frame	1
Product Name	dTDP-glucose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7)	-12.99
Kyte-Doolittle Hydrophobicity Value	-0.167
Molecular Weight (kDa)	40.0
Isoelectric Point (pI)	5.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004752 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_08182 Search term: dTDP-glucose 4,6-dehydratase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000283148 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 2.8e-28 Percent Identity: 27.6
Ensembl 110, assembly GRCh38.p14	ENSP00000387019 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 2.8e-28 Percent Identity: 27.6

References