Pseudomonas sp. CF149, CF149_05004

Gene Feature Overview

Strain	Pseudomonas sp. CF149 GCF_000416155.1|latest
Locus Tag	CF149_05004
NCBI Locus Tag	CF149_RS04945
Name
Replicon	soap_scaffs_149.Contig10
Genomic location	35216 - 35842 (- strand)

Cross-References

RefSeq	WP_019823536.1
GI	518661805
INSDC	EPJ94694.1
NCBI Locus Tag	CF149_RS04945
NCBI Old Locus Tag	CF149_05004
UniParc	UPI000357685E
UniProtKB Acc	S6JAE8
UniProtKB ID	S6JAE8_9PSED
UniRef100	UniRef100_S6JAE8
UniRef50	UniRef50_Q4K750
UniRef90	UniRef90_Q48LU1

Product

Feature Type	CDS
Coding Frame	1
Product Name	two component LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7)	3.13
Kyte-Doolittle Hydrophobicity Value	0.123
Molecular Weight (kDa)	22.8
Isoelectric Point (pI)	8.69

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000034 (777 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: CF149_05004 Search term: two component LuxR family transcriptional regulator

Human Homologs

References