Pseudomonas syringae BRIP39023, A988_14384
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae BRIP39023
GCF_000333995.1|latest |
| Locus Tag |
A988_14384
|
| NCBI Locus Tag | A988_RS11175 |
| Name |
|
| Replicon | scaffold10 |
| Genomic location | 518062 - 519426 (+ strand) |
Cross-References
| RefSeq | WP_003433725.1 |
| GI | 489528991 |
| NCBI Locus Tag | A988_RS11175 |
| NCBI Old Locus Tag | A988_14384 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
O-antigen ABC transporter, ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.20 |
| Kyte-Doolittle Hydrophobicity Value | -0.211 |
| Molecular Weight (kDa) | 50.1 |
| Isoelectric Point (pI) | 5.06 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001312 (602 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: A988_14384
Search term: O-antigen ABC transporter, ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value:
2.8e-17
Percent Identity:
26.1
|
References
No references are associated with this feature.