Pseudomonas syringae BRIP39023, A988_05605

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae BRIP39023
GCF_000333995.1|latest
Locus Tag
A988_05605
NCBI Locus TagA988_RS19815
Name
Replicon scaffold4
Genomic location 79362 - 80237 (- strand)

Cross-References

RefSeq WP_003431920.1
GI 489527172
NCBI Locus Tag A988_RS19815
NCBI Old Locus Tag A988_05605

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.20
Kyte-Doolittle Hydrophobicity Value 0.024
Molecular Weight (kDa) 32.3
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004529 (504 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: A988_05605

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 2.0e-13
Percent Identity: 26.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 2.0e-13
Percent Identity: 26.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value: 2.0e-13
Percent Identity: 26.7

References

No references are associated with this feature.