Pseudomonas taeanensis MS-3, TMS3_RS0113210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas taeanensis MS-3 - Assembly GCF_000498575.2
GCF_000498575.2|latest |
| Locus Tag |
TMS3_RS0113210
|
| Name |
|
| Replicon | contig_03 |
| Genomic location | 70349 - 71962 (+ strand) |
Cross-References
| RefSeq | WP_025165689.1 |
| GI | 640743634 |
| NCBI Locus Tag | TMS3_RS0113210 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
microcin ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.23 |
| Kyte-Doolittle Hydrophobicity Value | -0.022 |
| Molecular Weight (kDa) | 59.0 |
| Isoelectric Point (pI) | 7.17 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003590 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: TMS3_RS0113210
Search term: microcin ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]
E-value:
1.2e-19
Percent Identity:
34.9
|
References
No references are associated with this feature.