Pseudomonas pelagia CL-AP6, K787_RS0106250

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas pelagia CL-AP6
GCF_000410875.1|latest
Locus Tag
K787_RS0106250
Name
Replicon contig_7
Genomic location 61667 - 61960 (+ strand)

Cross-References

RefSeq WP_022961939.1
GI 551342527
NCBI Locus Tag K787_RS0106250

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.71
Kyte-Doolittle Hydrophobicity Value -0.561
Molecular Weight (kDa) 11.0
Isoelectric Point (pI) 9.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2IIE RECOMBINATION/DNA 09/28/06 single chain Integration Host Factor protein (scIHF2) in complex with DNA Escherichia coli; SYNTHETIC CONSTRUCT 2.41 X-RAY DIFFRACTION 92.3
2IIF RECOMBINATION/DNA 09/28/06 single chain Integration Host Factor mutant protein (scIHF2-K45aE) in complex with DNA Escherichia coli; SYNTHETIC CONSTRUCT 2.72 X-RAY DIFFRACTION 92.3

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002454 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: K787_RS0106250

Human Homologs

References

No references are associated with this feature.