Pseudomonas aeruginosa 19BR, IAI_RS0111400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa 19BR
GCF_000223945.1|latest
Locus Tag
IAI_RS0111400
Name
Replicon chromosome
Genomic location 2422317 - 2422901 (+ strand)

Cross-References

RefSeq WP_003123462.1
GI 489214769
NCBI Locus Tag IAI_RS0111400

Product

Feature Type CDS
Coding Frame 1
Product Name
TetR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.96
Kyte-Doolittle Hydrophobicity Value -0.285
Molecular Weight (kDa) 21.7
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4L62 TRANSCRIPTION/DNA 06/11/13 Crystal Structure of Pseudomonas aeruginosa transcriptional regulator PA2196 bound to its operator DNA Pseudomonas aeruginosa; SYNTHETIC CONSTRUCT 2.9 X-RAY DIFFRACTION 98.9
3RD3 TRANSCRIPTION 03/31/11 Structure of Pseudomonas aeruginosa transcriptional regulator PA2196 Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 99.0

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000241 (6008 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: IAI_RS0111400

Human Homologs

References

No references are associated with this feature.