Pseudomonas aeruginosa 213BR, IAK_RS0110155

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa 213BR
GCF_000223965.1|latest
Locus Tag
IAK_RS0110155
Name
Replicon chromosome
Genomic location 2122443 - 2122925 (+ strand)

Cross-References

RefSeq WP_003102689.1
GI 489193354

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.19
Kyte-Doolittle Hydrophobicity Value -0.063
Molecular Weight (kDa) 18.2
Isoelectric Point (pI) 8.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6CBQ transcription/agonist 02/05/18 Crystal structure of QscR bound to agonist S3 Pseudomonas aeruginosa 2.8 X-RAY DIFFRACTION 99.4
6CC0 TRANSCRIPTION 02/05/18 Crystal structure of QscR bound to C12-homoserine lactone Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 99.4
3SZT TRANSCRIPTION 07/19/11 Quorum Sensing Control Repressor, QscR, Bound to N-3-oxo-dodecanoyl-L-Homoserine Lactone Pseudomonas aeruginosa 2.55 X-RAY DIFFRACTION 99.4

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: IAK_RS0110155

Human Homologs

References

No references are associated with this feature.