Pseudomonas aeruginosa 9BR, GW5_RS0113675
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa 9BR
GCF_000223925.1|latest |
| Locus Tag |
GW5_RS0113675
|
| Name |
|
| Replicon | contig_1 |
| Genomic location | 2934502 - 2937690 (+ strand) |
Cross-References
| RefSeq | WP_003089834.1 |
| GI | 489180353 |
| NCBI Locus Tag | GW5_RS0113675 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.43 |
| Kyte-Doolittle Hydrophobicity Value | 0.284 |
| Molecular Weight (kDa) | 115.5 |
| Isoelectric Point (pI) | 5.41 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| MexF | MexF is the multidrug inner membrane transporter of the MexEF-OprN complex. mexF corresponds to 2 loci in Pseudomonas aeruginosa PAO1 (gene name: mexF/mexB) and 4 loci in Pseudomonas aeruginosa LESB58 (gene name: mexD/mexB). [PMID:10515918] | ARO:3000804 | protein homolog model | Perfect | 2016.5 | 100.0 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000417 (2093 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: GW5_RS0113675
Search term: transporter
|
Human Homologs
References
No references are associated with this feature.