Pseudomonas fluorescens R124, I1A_004912 (yggS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens R124
GCF_000292795.1|latest |
| Locus Tag |
I1A_004912
|
| Name |
yggS
|
| Replicon | chromosome |
| Genomic location | 5819470 - 5820156 (+ strand) |
Cross-References
| RefSeq | WP_003229116.1 |
| GI | 489321796 |
| NCBI Locus Tag | I1A_004912 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.86 |
| Kyte-Doolittle Hydrophobicity Value | -0.163 |
| Molecular Weight (kDa) | 24.8 |
| Isoelectric Point (pI) | 5.65 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000385 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: I1A_004912
Search term: yggS
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
pyridoxal phosphate binding protein [Source:HGNC Symbol;Acc:HGNC:9457]
E-value:
7.1e-30
Percent Identity:
40.1
|
References
No references are associated with this feature.