Pseudomonas sp. M47T1, PMM47T1_28346

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M47T1
GCF_000263855.1|latest
Locus Tag
PMM47T1_28346
Name
Replicon contig045
Genomic location 24165 - 25640 (- strand)

Cross-References

RefSeq WP_008375643.1
GI 495651064
INSDC EIK93178.1
NCBI Locus Tag PMM47T1_28346
UniParc UPI00026086C2
UniProtKB Acc I4MVD8
UniProtKB ID I4MVD8_9PSED
UniRef100 UniRef100_I4MVD8
UniRef50 UniRef50_G8Q745
UniRef90 UniRef90_G8Q745

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.63
Kyte-Doolittle Hydrophobicity Value -0.456
Molecular Weight (kDa) 55.5
Isoelectric Point (pI) 5.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000083 (1225 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMM47T1_28346

Human Homologs

References

No references are associated with this feature.