Pseudomonas sp. M47T1, PMM47T1_26702 (ligD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M47T1
GCF_000263855.1|latest
Locus Tag
PMM47T1_26702
Name
ligD
Replicon contig037
Genomic location 10151 - 12625 (- strand)

Cross-References

RefSeq WP_008374965.1
GI 495650386
INSDC EIK93451.1
NCBI Locus Tag PMM47T1_26702
UniParc UPI00026080E6
UniProtKB Acc I4MW61
UniProtKB ID I4MW61_9PSED
UniRef100 UniRef100_I4MW61
UniRef50 UniRef50_Q9I1X7
UniRef90 UniRef90_I4MW61

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent DNA ligase
Synonyms
Evidence for Translation
Charge (pH 7) 17.18
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 91.1
Isoelectric Point (pI) 9.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003336 (490 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMM47T1_26702
Search term: ligD

Human Homologs

References

No references are associated with this feature.