Pseudomonas sp. M47T1, PMM47T1_23829

Gene Feature Overview

Strain	Pseudomonas sp. M47T1 GCF_000263855.1|latest
Locus Tag	PMM47T1_23829
Name
Replicon	contig029
Genomic location	9720 - 11825 (- strand)

Cross-References

RefSeq	WP_008373826.1
GI	495649247
INSDC	EIK93978.1
NCBI Locus Tag	PMM47T1_23829
UniParc	UPI0002607DEC
UniProtKB Acc	I4MXN8
UniProtKB ID	I4MXN8_9PSED
UniRef100	UniRef100_I4MXN8
UniRef50	UniRef50_Q3IJ73
UniRef90	UniRef90_Q87WQ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7)	-16.14
Kyte-Doolittle Hydrophobicity Value	-0.013
Molecular Weight (kDa)	74.8
Isoelectric Point (pI)	4.95

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PMM47T1_23829 Search term: polynucleotide phosphorylase/polyadenylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 7.9e-112 Percent Identity: 35.6
Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 7.9e-112 Percent Identity: 35.6

References