Pseudomonas sp. M47T1, PMM47T1_17410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. M47T1
GCF_000263855.1|latest
Locus Tag
PMM47T1_17410
Name
Replicon contig016
Genomic location 62461 - 62967 (- strand)

Cross-References

RefSeq WP_008371236.1
GI 495646657
INSDC EIK95295.1
NCBI Locus Tag PMM47T1_17410
UniParc UPI0002608D8B
UniProtKB Acc I4N1F5
UniProtKB ID I4N1F5_9PSED
UniRef100 UniRef100_I4N1F5
UniRef50 UniRef50_E3HNJ7
UniRef90 UniRef90_I4N1F5

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 2.37
Kyte-Doolittle Hydrophobicity Value -0.021
Molecular Weight (kDa) 18.9
Isoelectric Point (pI) 8.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PMM47T1_17410

Human Homologs

References

No references are associated with this feature.