Pseudomonas syringae pv. syringae SM, PssSM_3486 (fliQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae SM
GCF_000412165.1|latest
Locus Tag
PssSM_3486
NCBI Locus TagPSSSM_RS08660
Name
fliQ
Replicon chromosome
Genomic location 4138355 - 4138624 (- strand)

Cross-References

RefSeq WP_003321783.1
GI 489415954
NCBI Locus Tag PSSSM_RS08660
NCBI Old Locus Tag PssSM_3486

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis protein FliQ
Synonyms
Evidence for Translation
Charge (pH 7) -2.05
Kyte-Doolittle Hydrophobicity Value 1.315
Molecular Weight (kDa) 9.9
Isoelectric Point (pI) 4.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6S3R PROTEIN TRANSPORT 06/25/19 Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi. Pseudomonas savastanoi pv. phaseolicola; Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 3.5 ELECTRON MICROSCOPY 98.9

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001364 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PssSM_3486
Search term: fliQ

Human Homologs

References

No references are associated with this feature.